CDS
| Accession Number | TCMCG019C08608 |
| gbkey | CDS |
| Protein Id | XP_022937860.1 |
| Location | join(1563859..1567148,1568308..1568701) |
| Gene | LOC111444124 |
| GeneID | 111444124 |
| Organism | Cucurbita moschata |
Protein
| Length | 1227aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA418582 |
| db_source | XM_023082092.1 |
| Definition | probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita moschata] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Pre-mRNA-splicing factor ATP-dependent RNA |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12818
[VIEW IN KEGG] |
| EC |
3.6.4.13
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGTTGCTTCCACGGCTAACGGCGACGATGGATTGAAGAAACTCGAGTACTTATCCCTTGTCTCTAAGGTATGTTCTGAGCTTGAAACTCATTTAGGTTTCGGAGATAAAGTTCTTGCTGAGTTCATAACGGAGATGGGACGGAGCTGTGAGACGGTGGATGAGTTCGATGCCAAATTGAAAGAGAATGGCGCGGAAATGCCTGATTACTTTGTTCGCTCGCTTCTGAGGATCATTCACCTTATTCTTCCTCCGCAGAAGAACAACGAAAAGGAGTTGAAGAAGGATAAGGAATCAGATGGGAAGAAGAGCAAGTTTCGGGCCTTGGTGATCGATGATGATCGGGAGAGAGCGAAGGAGCTGGAGAAGGAAATTGAGTTGGAGCTTCGCCAGAAGCGTGGGGACAGAGATGAAGAAGATGATCGATACAAGGGGAGGGCCGGGGACAGAGGAAAAGACAGAGAGAGGGACAGAGGAAAAGACAGAGAGAGGGACAGAGACAGAGACAGAGGTAGAGGTAGAGATAGAGATAGAGATAGGGATAGGGATAGTTACCGGGATCGGGATCGGGATAGAGATAGGCGCAGGGATAGATATGAAAGGGATGAGAGACATGGTGGCAGGGATCGCGATGATGATGGTGATGATGATCACCGGAGAAGCGGAAGGCAAAGGGATCGGAATAGGAAAAATGGATATGACGAAGATGAGCGTTATGGGGGTGATGCAGAAGCTGGTAATGGCAATTGGAGAGGTGATAGGGACAAGCATACACAAAATGGGCGACACCACCCTATCGACCAAGAACCTGAATTGTACAAGGTCTACAAGGGTAGAGTTTCCAGAGTGATGGACACGGGTTGCTTTGTCCAACTGAGCGACTTTAGAGGCAAGGAGGGTCTGGTTCATGTTTCTCAGATTGCCACCCGAAGGATTAGCAATGCCAAGGATGTTGTAAAGCGTGATCAAGAGGTTTATGTCAAGGTCATTTCATTTTCAGGGCAAAAGTTGAGCCTTTCTATGAGGGATGTCGATCAGCATTCTGGTAAGGATTTACTACCGTTAAAGAGAAAAGATGCTGACGATGGTCCTAGAATGAATCCTTCAGATTCAAAGGATGATGGGCCGGTGGTTAGGACTGGCCTTTCTGGGATTAAAATTGTGGAAGATGATGTTACTGTCCCTTCACGCAGACCTTTGAAGCGCATGAGCTCACCTGAGAGATGGGAAGCCAAGCAGCTGATGGCTTCTGGGGTTTTAAGTGTAAGCGAGTATCCTTCTTATGATGACGAGGGAGACGGATTATTATACCAAGAAGAGGGTGCTGCCGAAGAAGAGCTTGAGATTGAGTTGAATGAGGACGAGCCTGAATTTCTGCAAGGCCAGAGCAGATACTCAATTGATATGTCGCCAGTTAAGATCTTTAAAAATCCGGAAGGGTCACTGAGTCGAGCAGCTGCACTTCAATCTGCACTCATTAAGGAGCGTAGAGAAGTTCGTGAGCAGCAGCAGAGGACCATGCTCGATTCAATTCCAAAGGATCTTAATCGACCTTGGGAAGACCCTATGCCAGAGACTGGTGAGAGACATCTTGCACAGGAGCTCAGGGGTGTTGGCTTGTCGGCCTATGATATGCCAGAGTGGAAGAAGGATGCTTATGGAAAAGATATCAGTTTTGGGCAGAAGTCAAAGCTCTCTATCCAGGAACAGAGGCAGAGCTTACCCATTTACAAGCTGAAGAAAGAACTTATTCAGGCTGTTCATGATAATCAGGTTCTTGTTGTCATTGGTGAGACTGGTTCAGGTAAGACAACACAAGTAACTCAGTATCTTGCTGAAGCTGGGTACACAACATCTGGTAAAATTGGATGTACTCAACCACGTAGGGTGGCTGCAATGTCTGTTGCAAAGAGGGTTGCTGAAGAGTTTGGATGTCGCTTAGGAGAGGAAGTTGGATATGCTATTCGTTTCGAGGATTGTACAGGACCTGATACCGTGATCAAGTATATGACTGATGGTATGCTTCTTAGGGAGATTTTGATTGATGATAATTTGTCTCAGTACTCCGTAATTATGCTTGATGAAGCTCACGAGAGAACGATCTTCACTGATGTTCTTTTTGGGTTGCTGAAGAAACTTGTGAAAAGGAGACCCGATCTTCGTCTGATCGTCACATCCGCTACTTTAGATGCTGAAAAATTTTCAGGATATTTCTTCAATTGTAATATTTTTACAATTCCTGGGAGAACTTTCCCAGTGGAGATCCTCTATACCAAGCAGCCAGAAACTGATTATCTTGATGCTGCCTTAATCACTGTCTTGCAGATCCACTTGACAGAACCTGAAGGAGACGTACTTCTTTTCTTGACTGGTCAGGAGGAGATTGATTTTGCATGTCAGTCGCTCTACGAGAGAATGAAAGGACTTGGTAAAAACGTTCCCGAGTTAATTATTCTACCAGTCTACAGTGCCTTACCCAGTGAAATGCAGTCCAGGATATTTGAACCGGCTCCTCCGGGTAAAAGGAAAGTTGTAGTGGCTACGAACATTGCTGAGGCCTCGTTGACAATAGATGGAATTTTTTATGTTATTGATCCTGGATTCGCTAAACAGAATGTATATAACCCAAAGCAAGGGCTTGATTCTCTTGTTATTACACCAATCTCACAAGCATCAGCCAAACAGCGTGCAGGTCGTGCAGGACGAACAGGACCTGGAAAATGCTACCGCCTCTATACTGAGAGTGCTTATCGCAATGAGATGTCTCCTACATCAATACCAGAAATCCAGAGGATTAATCTTGGTCATACTACTCTTACTATGAAAGCAATGGGGATAAATGATCTTCTGTCATTTGATTTTATGGATCCACCTTCACCCCAAGCTCTAATTTCAGCAATGGAACAACTTTACAGTCTAGGAGCACTTGACGAAGAAGGACTTCTGACTAAGTTGGGTAGAAAAATGGCCGAGTTTCCGTTAGATCCACCTTTGTCTAAAATGCTGCTAGCTAGTGTGGATCTTGGATGCAGTGATGAGATCTTGACAATAATTGCTATGATTCAGACTGGAAATATCTTTTACAGGCCAAGGGAAAAACAAGCCCAGGCTGATCAGAAAAGGGCCAAATTTTTCCAGCCAGAGGGAGATCATCTGACTTTGCTTGCAGTTTATGAGGCATGGAAAGCCAAAAACTTTTCAGGCCCCTGGTGTTTTGAGAATTTTGTTCAATCTCGGTCCTTGAGGAGAGCGCAGGACGTGAGGAAACAACTTCTTTCGATTATGGACAAGTATAAATTGGACGTAGTGAGTGCAGGCAAGAATTTCACTCAGATAAGGAAGGCCATCACAGCCGGATTCTTTTTCCATGCAGCCAGAAAGGATCCTCAAGAGGGTTATCGGACTCTAGTCGAAAACCAACCAGTTTATATCCATCCGAGCAGTGCATTATTCCAAAGACAGCCCGACTGGGTCATATACCACGAGCTGGTCATGACGACAAAAGAATACATGCGCGAAGTAACAGTCATAGATCCCAAATGGCTCGTTGAATTAGCTCCAAGATACTTCAAAGTTGCAGATCCAACAAAGATGAGCAAGCGAAAGAGGCAAGAGCGTATCGAACCGCTCTACGACAGATATCACGAACCTAACTCTTGGCGATTGAGTAAGAGACGAGCTTAA |
| Protein: MVASTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYFVRSLLRIIHLILPPQKNNEKELKKDKESDGKKSKFRALVIDDDRERAKELEKEIELELRQKRGDRDEEDDRYKGRAGDRGKDRERDRGKDRERDRDRDRGRGRDRDRDRDRDSYRDRDRDRDRRRDRYERDERHGGRDRDDDGDDDHRRSGRQRDRNRKNGYDEDERYGGDAEAGNGNWRGDRDKHTQNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRKDADDGPRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA |